Curriculum vitae
Education
Ph.D. in Image Processing (2010 - 2015)
Masaryk University, Brno, Czech Republic
Doctoral thesis: Texture-Based Image Description in Fluorescence MicroscopyMaster in Finance (2010 - 2012)
Masaryk University, Brno, Czech Republic
Master thesis: The Use of Electronic Signature in Banking (in Slovak)Master in Applied Informatics (2008 - 2010)
Masaryk University, Brno, Czech Republic
Master thesis: Image Data Compression (in Slovak)Bachelor in Study of Religions (2014 - 2017)
Masaryk University, Brno, Czech Republic
Bachelor thesis: The Concept of Buddhist Economics from the Study of Religions View (in Slovak)Bachelor in Applied Informatics (2005 - 2008)
Masaryk University, Brno, Czech Republic
Bachelor thesis: Algorithms for Similarity Query Evaluation (in Slovak)
Research Positions
PostDoc @ Max Planck Institute of Biophysics (MPI) (since 2022)
Max Planck Society, Frankfurt am Main, Germany
Project: Establishing Experimental Model Systems for Visual Proteomics (Chan Zuckerberg Initiative)PostDoc @ Central European Institute of Technology (CEITEC) (2020 - 2022)
Masaryk University, Brno, Czech Republic
Project: Postdoc2@MUNI (No. CZ.02.2.69/0.0/0.0/18_053/0016952)PostDoc @ The Mærsk Mc-Kinney Møller Institute (MMMI) (2018 - 2020)
University of Southern Denmark, Odense, Denmark
Project: EFFICACY – An effective colorectal cancer-screening program based on novel dual-mode wireless endoscopic capsulesPostDoc @ Biocomputing Unit of Spanish National Centre for Biotechnology (CNB) (2017 - 2018)
Spanish National Research Council, Madrid, Spain
Project: H2020-WEST-LIFE-675858 – West life: World-wide E-infrastructure for structural biologyPostDoc @ Norwegian Colour and Visual Computing Laboratory (Colourlab) (2016 - 2017)
Norwegian University of Science and Technology, Gjøvik, Norway
Project: IQ-MED: Image Quality enhancement in MEDical diagnosis, monitoring and treatmentDoctoral @ Centre for Biomedical Image Analysis (CBIA) (2010 - 2015)
Masaryk University, Brno, Czech Republic
Projects: GBP302/12/G157 – Dynamics and Organization of Chromosomes in the Cell Cycle and during Differentiation under Normal and Pathological Conditions
GA14-22461S – Development and Study of Methods for Live Cell Quantification
Short Term Research Stays
STSM grant @ Faculty of Technical Sciences (FTN) (2 weeks in 2019)
University of Novi Sad, Novi Sad, Serbia
Project: Development and evaluation of 𝛼𝐿𝐵𝑃 − 𝑚𝑎𝑝𝑠 for improved classification in biomedical domainErasmus Research Internship @ Digital Media Technology (DMT) Lab (5 months in 2013)
Birmingham City University, Birmingham, United Kingdom
Project: The Analysis of CT Scans Through Hough Transform
Other Work Activities
Teaching (2011 - 2012)
Faculty of Informatics, Masaryk University, Brno, Czech Republic
Subject: Introduction to Programming using C (two semesters supervision of two seminar groups)Programming (2008 - 2016)
Institute of Computer Science, Masaryk University, Brno, Czech Republic
Project: Development of Masaryk University web presentation (part time)
Participations
CZI Imaging 2022 Annual Meeting, Burlingame, California, United States
Project presentationThe 3rd NEUBIAS Conference, Luxembourg city, Luxembourg
Poster presentationInternational Computer Vision Summer School (ICVSS 2016), Sicily, Italy
Passed final examination (Certificate)Summer School on Image Processing (SSIP 2015), Szeged, Hungary
Project: Microglia cells segmentation (Certificate)Medical Imaging Summer School (MISS 2014), Favignana, Sicily, Italy
Poster presentation (Certificate)Computer Vision Winter Workshop (CVWW 2014), Křtiny, Czech Republic
Poster presentation (Certificate)Image Acquisition and Processing in Biomedical Microscopy (2011)
Czech Academy of Sciences, Prague, Czech RepublicAdvanced Methods on Biomedical Image Analysis (AMBIA 2011), Brno, Czech Republic
Poster presentation (Certificate)
Technical Skills
- Active knowledge: MATLAB, LaTeX, C/C++
- Basic knowledge: C#, XML, SQL, Javascript, Python